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LOC4346886 uncharacterized LOC4346886 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4346886, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4346886
Gene description
uncharacterized LOC4346886
Locus tag
OSNPB_090369500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1759_F09.36-1; OJ1759_F09.36-2
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Genomic context

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See LOC4346886 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (16620487..16624602, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (12263302..12267500, complement)

Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351704 Neighboring gene probable trehalose-phosphate phosphatase 7 Neighboring gene uncharacterized LOC4346888 Neighboring gene protein SCO1 homolog 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4346886
Names
Os09g0369500

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

    Range
    16620487..16624602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015755443.3 → XP_015610929.1  uncharacterized protein LOC4346886

    UniProtKB/TrEMBL
    A0A0P0XKS0, Q0J286, Q6H5L3

  2. XM_015755444.3 → XP_015610930.1  uncharacterized protein LOC4346886

    UniProtKB/TrEMBL
    A0A0P0XKS0, Q0J286, Q6H5L3

  3. XM_015755445.3 → XP_015610931.1  uncharacterized protein LOC4346886

    UniProtKB/TrEMBL
    A0A0P0XKS0, Q0J286, Q6H5L3
Nucleotide Protein
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