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LOC4347132 beta-1,3-galactosyltransferase pvg3 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4347132, updated on 13-Jul-2024

Summary

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Gene symbol
LOC4347132
Gene description
beta-1,3-galactosyltransferase pvg3
Locus tag
OSNPB_090433000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1081_G10.4
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Genomic context

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See LOC4347132 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (20275977..20277556, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (15896222..15898016, complement)

Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene amino acid transporter AVT6A Neighboring gene uncharacterized LOC4347131 Neighboring gene uncharacterized LOC107277092 Neighboring gene uncharacterized LOC107275827

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase pvg3
Names
OSJNBa0039E17.37
Os09g0433000

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

    Range
    20275977..20277556 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015755260.3 → XP_015610746.1  beta-1,3-galactosyltransferase pvg3

    UniProtKB/TrEMBL
    A0A0P0XNF9, A2Z1J5, Q69MI0, Q69PI7
    Conserved Domains (1) summary
    PLN03193
    Location:76 → 251
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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