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LOC4348059 uncharacterized LOC4348059 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4348059, updated on 13-Jul-2024

Summary

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Gene symbol
LOC4348059
Gene description
uncharacterized LOC4348059
Locus tag
OSNPB_100135500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4348059 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (2204551..2206948)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (2196141..2199647)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4348057 Neighboring gene uncharacterized LOC4348058 Neighboring gene caffeoylshikimate esterase Neighboring gene uncharacterized LOC107278360 Neighboring gene small nucleolar RNA Z247

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4348059
Names
F-box domain-containing protein
Os10g0135500

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    2204551..2206948
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015759008.3 → XP_015614494.1  uncharacterized protein LOC4348059

    UniProtKB/TrEMBL
    A0A5S6RAH3, A2Z4V3, Q7XH24, Q9AYI3
Nucleotide Protein
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