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LOC4348097 uncharacterized LOC4348097 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4348097, updated on 10-Oct-2024

Summary

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Gene symbol
LOC4348097
Gene description
uncharacterized LOC4348097
Locus tag
OSNPB_100145100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4348097 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (2745736..2750551, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (2737048..2741880, complement)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112936560 Neighboring gene uncharacterized LOC4348096 Neighboring gene uncharacterized LOC4348098 Neighboring gene leucine-rich repeat receptor protein kinase HPCA1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC4348097
Names
F-box domain-containing protein
Os10g0145100

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    2745736..2750551 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066305005.1 → XP_066161102.1  uncharacterized protein LOC4348097 isoform X2

  2. XM_066305004.1 → XP_066161101.1  uncharacterized protein LOC4348097 isoform X1

    UniProtKB/TrEMBL
    Q0IYZ6, Q33B35
Nucleotide Protein
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