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LOC4348626 acylamino-acid-releasing enzyme 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4348626, updated on 16-Jul-2024

Summary

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Gene symbol
LOC4348626
Gene description
acylamino-acid-releasing enzyme 1-like
Locus tag
OSNPB_100415600
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
AARE1; OsJ_31520
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Genomic context

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See LOC4348626 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (15194428..15204839)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (14532819..14543000)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene glutathione reductase, chloroplastic Neighboring gene uncharacterized LOC136353627 Neighboring gene uncharacterized LOC4348624 Neighboring gene uncharacterized LOC136353628 Neighboring gene acylamino-acid-releasing enzyme 2-like Neighboring gene histone acetyltransferase GCN5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acylamino-acid-releasing enzyme 1
Names
Acylamino-acid-releasing enzyme 1
LOC_Os10g28020
Os10g0415600
NP_001409957.1
NP_001409958.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423028.1 → NP_001409957.1  acylamino-acid-releasing enzyme 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AK066606, AK070876, AK109190, CB673021, CI352163, CI397723

  2. NM_001423029.1 → NP_001409958.1  acylamino-acid-releasing enzyme 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK066606, AK070876, CB673021, CI352163, CI397723, CI585646
    UniProtKB/Swiss-Prot
    A0A0P0XU57, Q0IXP9, Q338C1
    UniProtKB/TrEMBL
    B8BGU2

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    15194428..15204839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003239116.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0IXP9.1 GenPept UniProtKB/Swiss-Prot:Q0IXP9

Gene LinkOut

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Molecular Biology Databases
Research Materials