Gm15097 predicted gene 15097 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Gm15097provided by MGI
Official Full Name: predicted gene 15097provided by MGI
Primary source: MGI:MGI:3710639
See related: Ensembl:ENSMUSG00000094378 AllianceGenome:MGI:3710639
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Ott-like
Expression: Restricted expression toward testis adult (RPKM 4.4) See more
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Genomic context

Location:: X F3; X 68.46 cM

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	X	NC_000086.8 (148567421..148609690)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	X	NC_000086.7 (149784425..149826694)

Chromosome X - NC_000086.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

NoName (e-PCR)
- UniSTS:238092

mOtt (e-PCR)
- UniSTS:514585

Ott (e-PCR), detects polymorphism
- UniSTS:265265

Ott (e-PCR), detects polymorphism
- UniSTS:144100

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: ovary testis transcribed

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001198987.2 → NP_001185916.2 ovary testis transcribed

Status: VALIDATED

Source sequence(s)

BX001010

Consensus CDS

CCDS53216.2

UniProtKB/TrEMBL

E9QA14, L7MU67

Related

ENSMUSP00000098740.2, ENSMUST00000101180.8

Conserved Domains (1) summary

pfam05091
Location:292 → 367

eIF-3_zeta; Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000086.8 Reference GRCm39 C57BL/6J

Range

148567421..148609690

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_011247839.2 → XP_011246141.1 ovary testis transcribed isoform X1

UniProtKB/TrEMBL

E9QA14

Conserved Domains (1) summary

PRK12678
Location:224 → 392

PRK12678; transcription termination factor Rho; Provisional