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LOC4349100 kinesin-like protein KIN-7K, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4349100, updated on 3-Dec-2024

Summary

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Gene symbol
LOC4349100
Gene description
kinesin-like protein KIN-7K, chloroplastic
Locus tag
OSNPB_100512800
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
KIN7K; OsJ_32142
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Genomic context

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See LOC4349100 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (20447805..20459097, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (19756761..19768047, complement)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4349098 Neighboring gene SH3 domain-containing protein 2 Neighboring gene dwarf and tiller-enhanced1 Neighboring gene uncharacterized LOC136353568

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional isolation of novel nuclear proteins showing a variety of subnuclear localizations. Moriguchi K, et al. Plant Cell, 2005 Feb. PMID 15659629, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinesin-like protein KIN-7K, chloroplastic
Names
LOC_Os10g36880
OSJNBa0026L12.18
centromere-associated protein E
putative kinesin motor domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423083.1 → NP_001410012.1  kinesin-like protein KIN-7K, chloroplastic

    Status: VALIDATED

    Source sequence(s)
    AK242756, BP184836, BP184837, CI007050
    UniProtKB/Swiss-Prot
    A0A0P0XW69, A3C6F4, Q7XCW8, Q9FW70
    UniProtKB/TrEMBL
    A2Z9A4

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    20447805..20459097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FW70.2 GenPept UniProtKB/Swiss-Prot:Q9FW70

Gene LinkOut

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Molecular Biology Databases
Research Materials