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LOC4351199 zinc finger protein ZAT8 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4351199, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4351199
Gene description
zinc finger protein ZAT8
Locus tag
OSNPB_110702400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
ZFP17
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Genomic context

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Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (30819946..30820781, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (28766044..28766950, complement)

Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene xylanase inhibitor protein 1-like Neighboring gene zinc finger protein ZAT18 Neighboring gene protein ALP1-like Neighboring gene osmotin-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger protein ZAT8
Names
C2H2 type zinc finger transcription factor ZFP17
Os11g0702400

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

    Range
    30819946..30820781 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015761043.3 → XP_015616529.1  zinc finger protein ZAT8

    UniProtKB/TrEMBL
    A2ZH01, A3CDY7, Q0IQX0, Q53NL6, Q7X9N7
    Conserved Domains (2) summary
    sd00017
    Location:47 → 67
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:98 → 122
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
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