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LOC4351356 uncharacterized LOC4351356 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4351356, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4351356
Gene description
uncharacterized LOC4351356
Locus tag
OSNPB_120121000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Expression
Broad expression in flower buds (RPKM 6.2), milk grains (RPKM 4.4) and 5 other tissues See more
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Genomic context

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See LOC4351356 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (1012736..1013480, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (988528..989475, complement)

Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT Neighboring gene protein LURP-one-related 5 Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene uncharacterized LOC136354642 Neighboring gene probable serine/threonine-protein kinase PBL8 Neighboring gene ethanolamine-phosphate cytidylyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC4351356
Names
Os12g0121000

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

    Range
    1012736..1013480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015764847.3 → XP_015620333.1  uncharacterized protein LOC4351356

    UniProtKB/TrEMBL
    A2ZHJ5, A3CEF7, Q2QYG0
Nucleotide Protein
Heading Accession and Version

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