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PRODHLP proline dehydrogenase like, pseudogene [ Homo sapiens (human) ]

Gene ID: 440792, updated on 27-Aug-2024

Summary

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Official Symbol
PRODHLPprovided by HGNC
Official Full Name
proline dehydrogenase like, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:56289
See related
Ensembl:ENSG00000161132
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
22q11.21
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (20299754..20313583)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (20681079..20694908)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (20287277..20301106)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372863 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20218512-20219305 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20225493-20226085 Neighboring gene Sharpr-MPRA regulatory region 11316 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13484 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20230230-20230822 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18673 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:20234375-20234965 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20235693-20236294 Neighboring gene reticulon 4 receptor Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20243726-20244270 Neighboring gene microRNA 1286 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:20254685-20255373 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13485 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13486 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13487 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20262187-20262687 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20269715-20270454 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20270455-20271195 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20271196-20271935 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13488 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20280047-20280548 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:20285530-20286031 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13489 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13490 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13491 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13492 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20300941-20301496 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:20301497-20302050 Neighboring gene Sharpr-MPRA regulatory region 9836 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13493 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13494 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:20307869-20308656 Neighboring gene DiGeorge syndrome critical region gene 6 like Neighboring gene family with sequence similarity 230 member G Neighboring gene MPRA-validated peak4456 silencer

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PRODH mutations and hyperprolinemia in a subset of schizophrenic patients. Jacquet H, et al. Hum Mol Genet, 2002 Sep 15. PMID 12217952

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • proline dehydrogenase 1 pseudogene

Clone Names

  • KIAA1653

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005508.6 

    Range
    101..13930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    20299754..20313583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    20681079..20694908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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