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MDV073 protein pp38 [ Gallid alphaherpesvirus 2 ]

Gene ID: 4811534, updated on 18-Aug-2023

Summary

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Gene symbol
MDV073
Gene description
protein pp38
Locus tag
MD5V_073
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallid alphaherpesvirus 2 (strain: Md5, common: Marek's disease virus type 1, acronym: GaHV-2, acronym: MDV-1, nat-host: Gallus gallus)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Mardivirus
Old locus tag
GaHV2Md5_gp073
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Genomic context

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Sequence:
NC_002229.3 (126421..127787, complement)

NC_002229.3Genomic Context describing neighboring genes Neighboring gene protein LORF4 Neighboring gene nuclear protein UL55 Neighboring gene myristylated tegument protein CIRC Neighboring gene protein LORF5 Neighboring gene membrane protein UL56 Neighboring gene oncoprotein MEQ Neighboring gene protein RLORF4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002229.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a very virulent Marek's disease virus mutant expressing the pp38 protein from the serotype 1 vaccine strain CVI988/Rispens. Lee LF, et al. Virus Genes, 2005 Aug. PMID 15965611
  2. Study on the structure of heteropolymer pp38/pp24 and its enhancement on the bi-directional promoter upstream of pp38 gene in Marek's disease virus. Ding J, et al. Sci China C Life Sci, 2008 Sep. PMID 18726529
  3. The genome of a very virulent Marek's disease virus. Tulman ER, et al. J Virol, 2000 Sep. PMID 10933706, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. pp38 is not involved in protective properties and tumor induction.
    Title: Characterization of a very virulent Marek's disease virus mutant expressing the pp38 protein from the serotype 1 vaccine strain CVI988/Rispens.
  2. Data show that pp38 and pp24 form a heteropolymer, which enhances the activity of the promoter.
    Title: Study on the structure of heteropolymer pp38/pp24 and its enhancement on the bi-directional promoter upstream of pp38 gene in Marek's disease virus.
Submit: New GeneRIF Correction

General gene information

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Homology

regulatory

  • Loc: c126426-126421 regulatory_class = polyA_signal_sequence

General protein information

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Preferred Names
protein pp38
YP_001033989.1
  • pp38 family

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002229.3 Reference assembly

    Range
    126421..127787 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001033989.1 protein pp38 [Gallid alphaherpesvirus 2]

    See identical proteins and their annotated locations for YP_001033989.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P30023, P31633, P68347, P68348, Q77MR0
    UniProtKB/TrEMBL
    G9CUH3, I6TM14, Q77Q52, Q89483
    Conserved Domains (1) summary
    pfam04846
    Location:213 → 275
    Herpes_pp38; Herpesvirus pp38 phosphoprotein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
WMBEAK.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases