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armc1 armadillo repeat containing 1 [ Danio rerio (zebrafish) ]

Gene ID: 494066, updated on 2-Nov-2024

Summary

Official Symbol
armc1provided by ZNC
Official Full Name
armadillo repeat containing 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-041212-33
See related
Ensembl:ENSDARG00000013861 AllianceGenome:ZFIN:ZDB-GENE-041212-33
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:103489
Summary
Predicted to enable metal ion binding activity. Predicted to be located in mitochondrial outer membrane. Orthologous to human ARMC1 (armadillo repeat containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See armc1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (24702020..24724226, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (24556846..24579052, complement)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family, member e22 Neighboring gene uncharacterized LOC101887106 Neighboring gene mitochondrial fission regulator 1 Neighboring gene phosphodiesterase 7A Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 5 beta

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
armadillo repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008609.1NP_001008609.1  armadillo repeat-containing protein 1

    See identical proteins and their annotated locations for NP_001008609.1

    Status: PROVISIONAL

    Source sequence(s)
    BC086818
    UniProtKB/TrEMBL
    A0A8M1N3L4, Q5PR58
    Related
    ENSDARP00000009420.7, ENSDART00000012399.8

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    24702020..24724226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)