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BC037156 cDNA sequence BC037156 [ Mus musculus (house mouse) ]

Gene ID: 494497, updated on 21-May-2024

Summary

Official Symbol
BC037156provided by MGI
Official Full Name
cDNA sequence BC037156provided by MGI
Primary source
MGI:MGI:3512757
See related
Ensembl:ENSMUSG00000105888 AllianceGenome:MGI:3512757
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
FDC-SP
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See BC037156 in Genome Data Viewer
Location:
5 E1; 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88056638..88062030)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (87908779..87914171)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene DAZ interacting protein 1 pseudogene Neighboring gene odontogenic, ameloblast asssociated Neighboring gene RIKEN cDNA 1700066N21 gene Neighboring gene casein kappa Neighboring gene cDNA sequence BC051076

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General protein information

Preferred Names
follicular dendritic cell secreted peptide

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305431.1NP_001292360.1  follicular dendritic cell secreted peptide precursor

    See identical proteins and their annotated locations for NP_001292360.1

    Status: VALIDATED

    Source sequence(s)
    AC022298
    UniProtKB/TrEMBL
    H9CWD5
    Related
    ENSMUSP00000160001.1, ENSMUST00000196993.3
    Conserved Domains (1) summary
    pfam15215
    Location:1761
    FDC-SP; Follicular dendritic cell secreted peptide

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    88056638..88062030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)