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Eif1ad2 eukaryotic translation initiation factor 1A domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 544881, updated on 17-Aug-2024

Summary

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Official Symbol
Eif1ad2provided by MGI
Official Full Name
eukaryotic translation initiation factor 1A domain containing 2provided by MGI
Primary source
MGI:MGI:3034635
See related
Ensembl:ENSMUSG00000079031 AllianceGenome:MGI:3034635
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable ribosomal large subunit binding activity and translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be active in cytoplasm. Orthologous to human EIF1AY (eukaryotic translation initiation factor 1A Y-linked). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 1.2) See more
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Genomic context

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See Eif1ad2 in Genome Data Viewer
Location:
12 D2; 12 41.96 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (87783347..87787446)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (87816577..87820676)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 1A domain containing 19 Neighboring gene RNA exonuclease 1 homolog Neighboring gene eukaryotic translation initiation factor 1A domain containing 13 Neighboring gene GLE1 RNA export mediator pseudogene Neighboring gene STARR-seq mESC enhancer starr_32895 Neighboring gene ubiquitin-like 5C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC182568

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables translation initiation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in translational initiation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
eukaryotic translation initiation factor 1A-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177573.1 → NP_001171044.1  eukaryotic translation initiation factor 1A-like 3

    See identical proteins and their annotated locations for NP_001171044.1

    Status: VALIDATED

    Source sequence(s)
    AC211878
    Consensus CDS
    CCDS49126.1
    UniProtKB/TrEMBL
    J3QMW5, Q3UT53
    Related
    ENSMUSP00000105776.2, ENSMUST00000110149.2
    Conserved Domains (1) summary
    PTZ00329
    Location:1 → 131
    PTZ00329; eukaryotic translation initiation factor 1A; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    87783347..87787446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001033788.1: Suppressed sequence

    Description
    NM_001033788.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.

  2. NR_003629.1: Suppressed sequence

    Description
    NR_003629.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.
Nucleotide Protein Strain
Heading Accession and Version

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