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Gm5848 predicted pseudogene 5848 [ Mus musculus (house mouse) ]

Gene ID: 545531, updated on 17-Aug-2024

Summary

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Official Symbol
Gm5848provided by MGI
Official Full Name
predicted pseudogene 5848provided by MGI
Primary source
MGI:MGI:3648047
See related
AllianceGenome:MGI:3648047
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG545531
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Genomic context

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See Gm5848 in Genome Data Viewer
Location:
3 E1; 3 31.63 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (68213523..68217869, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (68306190..68310535, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07894 Neighboring gene predicted gene, 40068 Neighboring gene Iqcj and Schip1 fusion protein Neighboring gene STARR-seq mESC enhancer starr_07895 Neighboring gene IQ motif containing J Neighboring gene STARR-seq mESC enhancer starr_07896 Neighboring gene schwannomin interacting protein 1 Neighboring gene predicted gene, 54202 Neighboring gene alkylglycerone phosphate synthase pseudogene Neighboring gene predicted gene 10723

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
small nuclear ribonucleoprotein Sm D2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    68213523..68217869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036163497.1 → XP_036019390.1  small nuclear ribonucleoprotein Sm D2-like

    Conserved Domains (1) summary
    cd01720
    Location:24 → 113
    Sm_D2; Sm protein D2
Nucleotide Protein Strain
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