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timmdc1 translocase of inner mitochondrial membrane domain containing 1 [ Danio rerio (zebrafish) ]

Gene ID: 550526, updated on 2-Nov-2024

Summary

Official Symbol
timmdc1provided by ZNC
Official Full Name
translocase of inner mitochondrial membrane domain containing 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-369
See related
Ensembl:ENSDARG00000053466 AllianceGenome:ZFIN:ZDB-GENE-050417-369
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:6892919; zgc:110196
Summary
Predicted to be located in mitochondrial membrane. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 31. Orthologous to human TIMMDC1 (translocase of inner mitochondrial membrane domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See timmdc1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (28835506..28861163, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (28031932..28057811, complement)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene general transcription factor II-I repeat domain-containing protein 2-like Neighboring gene zgc:172295 Neighboring gene protein O-glucosyltransferase 1 Neighboring gene PWP2 small subunit processome component

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
complex I assembly factor TIMMDC1, mitochondrial
Names
TIMM domain containing-protein 1
translocase of inner mitochondrial membrane domain-containing protein 1
transmembrane protein C3orf1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017828.1NP_001017828.1  complex I assembly factor TIMMDC1, mitochondrial

    See identical proteins and their annotated locations for NP_001017828.1

    Status: PROVISIONAL

    Source sequence(s)
    BC092788
    UniProtKB/Swiss-Prot
    Q568N3
    Related
    ENSDARP00000069984.3, ENSDART00000075502.5
    Conserved Domains (1) summary
    pfam02466
    Location:85214
    Tim17; Tim17/Tim22/Tim23/Pmp24 family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    28835506..28861163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)