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lratd2b LRAT domain containing 2b [ Danio rerio (zebrafish) ]

Gene ID: 550535, updated on 2-Nov-2024

Summary

Official Symbol
lratd2bprovided by ZNC
Official Full Name
LRAT domain containing 2bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-381
See related
Ensembl:ENSDARG00000040280 AllianceGenome:ZFIN:ZDB-GENE-050417-381
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fl22g01; zgc:110182
Summary
Orthologous to human LRATD2 (LRAT domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See lratd2b in Genome Data Viewer
Location:
chromosome: 16
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (25231963..25233401, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (25316931..25318369, complement)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene hematopoietic cell signal transducer Neighboring gene transmembrane immune signaling adaptor TYROBP Neighboring gene kelch-like family member 38b Neighboring gene F-box protein 32

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC550535

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017837.1NP_001017837.1  uncharacterized protein LOC550535

    See identical proteins and their annotated locations for NP_001017837.1

    Status: PREDICTED

    Source sequence(s)
    BC092778
    UniProtKB/TrEMBL
    A0A8M1N5C5, Q568P3
    Related
    ENSDARP00000058942.3, ENSDART00000058943.5
    Conserved Domains (1) summary
    cl21534
    Location:114196
    NLPC_P60; NlpC/P60 family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    25231963..25233401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)