mrpl1 mitochondrial ribosomal protein L1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mrpl1provided by ZNC
Official Full Name: mitochondrial ribosomal protein L1provided by ZNC
Primary source: ZFIN:ZDB-GENE-060526-311
See related: Ensembl:ENSDARG00000054606 AllianceGenome:ZFIN:ZDB-GENE-060526-311
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: si:dkey-58f10.1
Summary: Predicted to be located in ribosome. Predicted to be part of ribonucleoprotein complex. Orthologous to human MRPL1 (mitochondrial ribosomal protein L1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (38825217..38834564)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (38225064..38234411)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: large ribosomal subunit protein uL1m

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001204133.1 → NP_001191062.1 large ribosomal subunit protein uL1m

Status: VALIDATED

Source sequence(s)

BC086850, EH555199

UniProtKB/TrEMBL

A0A8M1NYL4, Q5PR27

Related

ENSDARP00000071305.5, ENSDART00000076835.6

Conserved Domains (1) summary

cl00322
Location:98 → 241

Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...