s100z S100 calcium binding protein Z [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: s100zprovided by ZNC
Official Full Name: S100 calcium binding protein Zprovided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-69
See related: Ensembl:ENSDARG00000038729 AllianceGenome:ZFIN:ZDB-GENE-050522-69
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wu:fj01a12; zgc:110464
Summary: Predicted to enable calcium ion binding activity and calcium-dependent protein binding activity. Is expressed in several structures, including digestive system; heart; integument; renal system; and sensory system. Orthologous to human S100Z (S100 calcium binding protein Z). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 21

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	21	NC_007132.7 (7863243..7882905, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	21	NC_007132.6 (7258022..7277684, complement)

Chromosome 21 - NC_007132.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables calcium ion binding	IBA Inferred from Biological aspect of Ancestor more info
enables calcium ion binding	IDA Inferred from Direct Assay more info	PubMed
enables calcium ion binding	IEA Inferred from Electronic Annotation more info
enables calcium-dependent protein binding	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: protein S100-Z

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001024391.2 → NP_001019562.1 protein S100-Z

See identical proteins and their annotated locations for NP_001019562.1

Status: VALIDATED

Source sequence(s)

CABZ01034876, EH433312, EH445558

UniProtKB/Swiss-Prot

A0A8M1N6S9, Q503K9

Related

ENSDARP00000056560.5, ENSDART00000056561.8

Conserved Domains (1) summary

cd05026
Location:1 → 93

S-100Z; S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, ...