tmem209 transmembrane protein 209 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tmem209provided by ZNC
Official Full Name: transmembrane protein 209provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-2879
See related: Ensembl:ENSDARG00000039340 AllianceGenome:ZFIN:ZDB-GENE-030131-2879
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc20f10; fe36f06; im:6909884; wu:fc20f10; wu:fe36f06; si:ch211-240j22.1
Summary: Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human TMEM209 (transmembrane protein 209). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (5093720..5108947, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (5085150..5100377, complement)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

fe36f06.x1 (e-PCR)
- UniSTS:196392

fi68c05.x1 (e-PCR)
- UniSTS:197847

fc20f10.y1 (e-PCR)
- UniSTS:193008

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: transmembrane protein 209

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001270973.1 → NP_001257902.1 transmembrane protein 209

Status: VALIDATED

Source sequence(s)

CR751235, CU468915

UniProtKB/TrEMBL

A0A8M1NZT5, F6P528

Related

ENSDARP00000119854.2, ENSDART00000136096.4

Conserved Domains (1) summary

pfam09786
Location:10 → 552

CytochromB561_N; Cytochrome B561, N terminal