akna AT-hook transcription factor [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: aknaprovided by ZNC
Official Full Name: AT-hook transcription factorprovided by ZNC
Primary source: ZFIN:ZDB-GENE-091204-170
See related: Ensembl:ENSDARG00000087110 AllianceGenome:ZFIN:ZDB-GENE-091204-170
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: si:ch211-86k6.3; si:ch211-86k6.4; si:ch211-86k6.5
Summary: Predicted to be involved in epithelial to mesenchymal transition; neuroblast delamination; and neuroblast division in subventricular zone. Predicted to be active in centrosome. Orthologous to human AKNA (AT-hook transcription factor). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	21	NC_007132.7 (13923562..13972722, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	21	NC_007132.6 (13827011..13876022, complement)

Chromosome 21 - NC_007132.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Process	Evidence Code	Pubs
involved_in epithelial to mesenchymal transition	IBA Inferred from Biological aspect of Ancestor more info
involved_in neuroblast delamination	IBA Inferred from Biological aspect of Ancestor more info
involved_in neuroblast division in subventricular zone	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in centrosome	IBA Inferred from Biological aspect of Ancestor more info

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The following sections contain reference sequences that belong to a specific genome build. Explain

XM_068216015.1 → XP_068072116.1 microtubule organization protein AKNA isoform X2
XM_005161116.5 → XP_005161173.1 microtubule organization protein AKNA isoform X1

See identical proteins and their annotated locations for XP_005161173.1

UniProtKB/TrEMBL

A0A8N7UUX9, E7EZN5, E9QHW6

Related

ENSDARP00000122036.2, ENSDART00000143874.3

Conserved Domains (1) summary

cd00890
Location:501 → 563

Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...