si:ch211-141o9.10 si:ch211-141o9.10 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:ch211-141o9.10provided by ZNC
Official Full Name: si:ch211-141o9.10provided by ZNC
Primary source: ZFIN:ZDB-GENE-130603-5
See related: Ensembl:ENSDARG00000077900 AllianceGenome:ZFIN:ZDB-GENE-130603-5
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable DNA-(apurinic or apyrimidinic site) endonuclease activity and phosphoric diester hydrolase activity. Predicted to be involved in base-excision repair. Predicted to act upstream of or within DNA repair. Predicted to be active in mitochondrion and nucleus. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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See si:ch211-141o9.10 in Genome Data Viewer

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (19275418..19282202, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (19153544..19160718, complement)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA damage response	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within DNA repair	IEA Inferred from Electronic Annotation more info