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si:ch211-67e16.4 si:ch211-67e16.4 [ Danio rerio (zebrafish) ]

Gene ID: 558404, updated on 12-Sep-2024

Summary

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Official Symbol
si:ch211-67e16.4provided by ZNC
Official Full Name
si:ch211-67e16.4provided by ZNC
Primary source
ZFIN:ZDB-GENE-070912-311
See related
Ensembl:ENSDARG00000086317 AllianceGenome:ZFIN:ZDB-GENE-070912-311
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See si:ch211-67e16.4 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (14023398..14043543)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (14051652..14070451)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene si:ch211-67e16.3 Neighboring gene CD28 molecule Neighboring gene uncharacterized LOC137496458 Neighboring gene fer-1 like family member 6 Neighboring gene protein kinase, AMP-activated, gamma 3b non-catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein si:ch211-67e16.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    14023398..14043543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005167513.5 → XP_005167570.1  uncharacterized protein si:ch211-67e16.4 isoform X1

    UniProtKB/TrEMBL
    A0A8M2BEX4

  2. XM_005167514.5 → XP_005167571.1  uncharacterized protein si:ch211-67e16.4 isoform X2

    UniProtKB/TrEMBL
    A0A8M2BEZ4

  3. XM_681607.9 → XP_686699.4  uncharacterized protein si:ch211-67e16.4 isoform X3

    UniProtKB/TrEMBL
    A0A8N7T700, E7FEY9
    Related
    ENSDARP00000105628.2, ENSDART00000124267.4
    Conserved Domains (1) summary
    pfam16064
    Location:386 → 454
    DUF4806; Domain of unknown function (DUF4806)

  4. XM_068223567.1 → XP_068079668.1  uncharacterized protein si:ch211-67e16.4 isoform X4

  5. XM_005167515.5 → XP_005167572.1  uncharacterized protein si:ch211-67e16.4 isoform X5

    UniProtKB/TrEMBL
    A0A8M2BEW1

  6. XM_068223568.1 → XP_068079669.1  uncharacterized protein si:ch211-67e16.4 isoform X6

Nucleotide Protein Strain
Heading Accession and Version

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