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soul4 heme-binding protein soul4 [ Danio rerio (zebrafish) ]

Gene ID: 558832, updated on 2-Nov-2024

Summary

Official Symbol
soul4provided by ZNC
Official Full Name
heme-binding protein soul4provided by ZNC
Primary source
ZFIN:ZDB-GENE-110718-1
See related
Ensembl:ENSDARG00000101008 AllianceGenome:ZFIN:ZDB-GENE-110718-1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable heme binding activity. Is expressed in blastomere; nervous system; otic vesicle; and pronephric duct. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See soul4 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38468036..38480154, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (38481750..38493868, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene MAP/microtubule affinity-regulating kinase 1 Neighboring gene protein tyrosine kinase 7a Neighboring gene si:ch211-126j24.1 Neighboring gene kinesin light chain 4

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001245995.1NP_001232924.1  heme-binding protein soul4

    See identical proteins and their annotated locations for NP_001232924.1

    Status: PROVISIONAL

    Source sequence(s)
    HQ450693
    UniProtKB/TrEMBL
    A0A8M1NYU5, F2XG13
    Related
    ENSDARP00000141664.1, ENSDART00000171704.2
    Conserved Domains (1) summary
    pfam04832
    Location:90246
    SOUL; SOUL heme-binding protein

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    38468036..38480154 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)