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nol7 nucleolar protein 7 [ Danio rerio (zebrafish) ]

Gene ID: 558911, updated on 9-Dec-2024

Summary

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Official Symbol
nol7provided by ZNC
Official Full Name
nucleolar protein 7provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-9100
See related
Ensembl:ENSDARG00000075795 AllianceGenome:ZFIN:ZDB-GENE-030131-9100
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fa99c08; wu:fa99c08
Summary
Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human NOL7 (nucleolar protein 7). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
human mouse all
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Genomic context

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See nol7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (31830183..31833356, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (31846965..31850133, complement)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene ring finger protein 182 Neighboring gene RAN binding protein 9 Neighboring gene ependymin related 1 Neighboring gene STARD3 N-terminal like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nucleolar protein 7; U3 small nucleolar RNA-associated protein NOL7
Names
nucleolar protein 7, 27kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    31830183..31833356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_682189.8 → XP_687281.4  U3 small nucleolar RNA-associated protein NOL7

    UniProtKB/TrEMBL
    A0A8N7T719, F1QS46
    Related
    ENSDARP00000097767.2, ENSDART00000109460.3
    Conserved Domains (1) summary
    pfam08157
    Location:157 → 219
    NUC129; NUC129 domain
Nucleotide Protein Strain
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