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Btg4 BTG anti-proliferation factor 4 [ Mus musculus (house mouse) ]

Gene ID: 56057, updated on 9-Aug-2024

Summary

Official Symbol
Btg4provided by MGI
Official Full Name
BTG anti-proliferation factor 4provided by MGI
Primary source
MGI:MGI:1860140
See related
Ensembl:ENSMUSG00000032056 AllianceGenome:MGI:1860140
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PC3B
Summary
Acts upstream of or within negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; early embryo; gonad; nasal cavity epithelium; and retina. Orthologous to human BTG4 (BTG anti-proliferation factor 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 2.3) See more
Orthologs
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Genomic context

See Btg4 in Genome Data Viewer
Location:
9 A5.3; 9 27.84 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (51013486..51031224)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (51102147..51119924)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2, regulatory subunit A, beta Neighboring gene salt inducible kinase 2 Neighboring gene STARR-seq mESC enhancer starr_24123 Neighboring gene STARR-seq mESC enhancer starr_24124 Neighboring gene STARR-positive B cell enhancer ABC_E8290 Neighboring gene predicted gene, 32681 Neighboring gene layilin Neighboring gene STARR-seq mESC enhancer starr_24125 Neighboring gene HOATZ cilia and flagella associated protein Neighboring gene microRNA 34b Neighboring gene microRNA 34c Neighboring gene predicted gene, 32742 Neighboring gene STARR-positive B cell enhancer ABC_E10544 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:50973591-50973879 Neighboring gene STARR-seq mESC enhancer starr_24126 Neighboring gene STARR-positive B cell enhancer ABC_E6731 Neighboring gene STARR-positive B cell enhancer ABC_E10545 Neighboring gene STARR-positive B cell enhancer ABC_E6732 Neighboring gene POU domain, class 2, associating factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
protein BTG4
Names
B cell translocation gene 4
BTG family member 4
protein PC3b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001401092.1NP_001388021.1  protein BTG4

    Status: VALIDATED

    Source sequence(s)
    AC119831
    UniProtKB/Swiss-Prot
    O70552, Q925T9
    UniProtKB/TrEMBL
    Q6NXZ4
    Related
    ENSMUSP00000149181.2, ENSMUST00000213680.2
  2. NM_019493.5NP_062366.2  protein BTG4

    See identical proteins and their annotated locations for NP_062366.2

    Status: VALIDATED

    Source sequence(s)
    AC119831
    Consensus CDS
    CCDS40629.1
    UniProtKB/Swiss-Prot
    O70552, Q925T9
    UniProtKB/TrEMBL
    Q6NXZ4
    Related
    ENSMUSP00000110074.3, ENSMUST00000114431.4
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    51013486..51031224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006510500.4XP_006510563.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510563.1

    UniProtKB/Swiss-Prot
    O70552, Q925T9
    UniProtKB/TrEMBL
    Q6NXZ4
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  2. XM_006510499.4XP_006510562.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510562.1

    UniProtKB/Swiss-Prot
    O70552, Q925T9
    UniProtKB/TrEMBL
    Q6NXZ4
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  3. XM_017313490.2XP_017168979.1  protein BTG4 isoform X1

    UniProtKB/Swiss-Prot
    O70552, Q925T9
    UniProtKB/TrEMBL
    Q6NXZ4
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  4. XM_006510501.4XP_006510564.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510564.1

    UniProtKB/Swiss-Prot
    O70552, Q925T9
    UniProtKB/TrEMBL
    Q6NXZ4
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  5. XM_006510502.3XP_006510565.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510565.1

    UniProtKB/Swiss-Prot
    O70552, Q925T9
    UniProtKB/TrEMBL
    Q6NXZ4
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family