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si:ch211-119e14.1 si:ch211-119e14.1 [ Danio rerio (zebrafish) ]

Gene ID: 560599, updated on 12-Sep-2024

Summary

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Official Symbol
si:ch211-119e14.1provided by ZNC
Official Full Name
si:ch211-119e14.1provided by ZNC
Primary source
ZFIN:ZDB-GENE-141216-162
See related
Ensembl:ENSDARG00000099518 AllianceGenome:ZFIN:ZDB-GENE-141216-162
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See si:ch211-119e14.1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (18608536..18617163, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (18356513..18360492, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene deltex 4, E3 ubiquitin ligase a Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene coronin, actin binding protein, 1B Neighboring gene nectin cell adhesion molecule 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in cilium IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein si:ch211-119e14.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    18608536..18617163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_683997.9 → XP_689089.2  uncharacterized protein si:ch211-119e14.1

    UniProtKB/TrEMBL
    A0A0R4IFY5, A0A8N7TAW9
    Related
    ENSDARP00000134165.1, ENSDART00000172419.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials