mrps5 mitochondrial ribosomal protein S5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mrps5provided by ZNC
Official Full Name: mitochondrial ribosomal protein S5provided by ZNC
Primary source: ZFIN:ZDB-GENE-060929-264
See related: Ensembl:ENSDARG00000062209 AllianceGenome:ZFIN:ZDB-GENE-060929-264
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:153680
Summary: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS5 (mitochondrial ribosomal protein S5). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (22107702..22137149, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (22087866..22117313, complement)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables structural constituent of ribosome	IBA Inferred from Biological aspect of Ancestor more info
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in translation	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of mitochondrial small ribosomal subunit	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: small ribosomal subunit protein uS5m

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001076596.1 → NP_001070064.1 small ribosomal subunit protein uS5m precursor

See identical proteins and their annotated locations for NP_001070064.1

Status: PROVISIONAL

Source sequence(s)

BC124422

UniProtKB/TrEMBL

Q08C39

Related

ENSDARP00000084122.5, ENSDART00000089689.6

Conserved Domains (3) summary

TIGR01021
Location:184 → 339

rpsE_bact; ribosomal protein S5, bacterial/organelle type

pfam00333
Location:185 → 250

Ribosomal_S5; Ribosomal protein S5, N-terminal domain

pfam03719
Location:262 → 332

Ribosomal_S5_C; Ribosomal protein S5, C-terminal domain