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zgc:162344 zgc:162344 [ Danio rerio (zebrafish) ]

Gene ID: 563289, updated on 2-Nov-2024

Summary

Official Symbol
zgc:162344provided by ZNC
Official Full Name
zgc:162344provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6058
See related
Ensembl:ENSDARG00000070040 AllianceGenome:ZFIN:ZDB-GENE-030131-6058
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fi32h08; wu:fi32h08
Summary
Orthologous to human KIAA1328 (KIAA1328). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See zgc:162344 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (12036238..12074210)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (11943610..11981578)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene aquaporin 7 Neighboring gene tubulin polyglutamylase complex subunit 2 Neighboring gene CUGBP, Elav-like family member 4 Neighboring gene uncharacterized LOC137488786 Neighboring gene uncharacterized LOC101886387

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083836.1NP_001077305.1  protein hinderin

    See identical proteins and their annotated locations for NP_001077305.1

    Status: PROVISIONAL

    Source sequence(s)
    BC134967
    UniProtKB/TrEMBL
    A4IG80
    Related
    ENSDARP00000093240.3, ENSDART00000102463.5
    Conserved Domains (1) summary
    pfam15369
    Location:122399
    KIAA1328; uncharacterized protein KIAA1328

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    12036238..12074210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068215913.1XP_068072014.1  protein hinderin isoform X2

  2. XM_021468884.2XP_021324559.1  protein hinderin isoform X1

    UniProtKB/TrEMBL
    A0A8M9PID5
    Conserved Domains (1) summary
    pfam15369
    Location:118394
    KIAA1328; Uncharacterized protein KIAA1328