uts1 urotensin 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: uts1provided by ZNC
Official Full Name: urotensin 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-041014-348
See related: Ensembl:ENSDARG00000014927 AllianceGenome:ZFIN:ZDB-GENE-041014-348
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ucn; UCN1; wu:fq17a01; si:ch211-243j20.4
Summary: Predicted to enable hormone activity. Predicted to be located in extracellular region. Is expressed in several structures, including basal plate midbrain region; heart; nervous system; pectoral fin; and testis. Orthologous to human UCN (urocortin). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (38724575..38727396)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (38821597..38824517)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Results describe the distribution of urotensin I, UIIalpha and UIIbeta mRNAs in different organs and the cellular localization of the three mRNAs in the spinal cord by in situ hybridization (ISH) histochemistry.
Title: Comparative distribution of the mRNAs encoding urotensin I and urotensin II in zebrafish.
U1 localized in the preoptic area, periventricular hypothalamic and tectal regions, and dorsal part of the trigeminal motor nucleus and several nuclei of the dorsal telencephalon.
Title: Localization of corticotropin-releasing factor, urotensin I, and CRF-binding protein gene expression in the brain of the zebrafish, Danio rerio.

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables hormone activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: urotensin 1

Names: UI; urocortin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001030180.1 → NP_001025351.1 urotensin 1 precursor

Status: PROVISIONAL

Source sequence(s)

BX510372

UniProtKB/TrEMBL

A0A8M1N7B1, Q5TZ50

Related

ENSDARP00000019621.7, ENSDART00000015095.8

Conserved Domains (1) summary

smart00039
Location:97 → 136

CRF; corticotropin-releasing factor