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slc2a11l solute carrier family 2 member 11, like [ Danio rerio (zebrafish) ]

Gene ID: 564849, updated on 14-Nov-2024

Summary

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Official Symbol
slc2a11lprovided by ZNC
Official Full Name
solute carrier family 2 member 11, likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-061215-118
See related
Ensembl:ENSDARG00000062873 AllianceGenome:ZFIN:ZDB-GENE-061215-118
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:158393
Summary
Predicted to enable hexose transmembrane transporter activity. Predicted to be involved in monosaccharide transmembrane transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in central nervous system; heart; integument; kidney; and muscle. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See slc2a11l in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (17485945..17501505, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (17528511..17544071, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene microRNA 301c Neighboring gene uncharacterized LOC137496576 Neighboring gene 5'-nucleotidase, cytosolic II, like 1 Neighboring gene uncharacterized LOC795962 Neighboring gene solute carrier family 2, facilitated glucose transporter member 11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Functional visualization and disruption of targeted genes using CRISPR/Cas9-mediated eGFP reporter integration in zebrafish. Ota S, et al. Sci Rep, 2016 Oct 11. PMID 27725766, Free PMC Article
  2. Specific expression and regulation of glucose transporters in zebrafish ionocytes. Tseng YC, et al. Am J Physiol Regul Integr Comp Physiol, 2009 Aug. PMID 19458281
  3. Loss of glyoxalase 2 alters the glucose metabolism in zebrafish. Tabler CT, et al. Redox Biol, 2023 Feb. PMID 36535130, Free PMC Article
  4. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables D-glucose transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in D-glucose import IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in dehydroascorbic acid transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
solute carrier family 2 member 11, like
Names
solute carrier family 2 (facilitated glucose transporter), member 11-like
zglut11c

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080016.1 → NP_001073485.1  solute carrier family 2 member 11, like

    See identical proteins and their annotated locations for NP_001073485.1

    Status: PROVISIONAL

    Source sequence(s)
    BC128857
    UniProtKB/TrEMBL
    A1A5Y3
    Related
    ENSDARP00000115161.1, ENSDART00000144847.3
    Conserved Domains (2) summary
    cd06174
    Location:69 → 200
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam00083
    Location:19 → 473
    Sugar_tr; Sugar (and other) transporter

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    17485945..17501505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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