map9 microtubule-associated protein 9 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: map9provided by ZNC
Official Full Name: microtubule-associated protein 9provided by ZNC
Primary source: ZFIN:ZDB-GENE-080225-36
See related: Ensembl:ENSDARG00000037276 AllianceGenome:ZFIN:ZDB-GENE-080225-36
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ASAP; a0274750; im:7158971; df:a0274750; xx:a0274750; si:ch73-34b5.1
Summary: Predicted to enable microtubule binding activity. Acts upstream of or within epiboly involved in gastrulation with mouth forming second and mitotic cell cycle. Located in centrosome; microtubule; and mitotic spindle. Is expressed in basal plate midbrain region; diencephalon; olfactory placode; spinal cord; and tegmentum. Orthologous to human MAP9 (microtubule associated protein 9). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (25737767..25749839, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (25046938..25059059, complement)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Map9 is a crucial factor in early zebrafish development by regulating different MT-based processes.
Title: Microtubule-associated protein 9 (Map9/Asap) is required for the early steps of zebrafish development.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within epiboly involved in gastrulation with mouth forming second	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within mitotic cell cycle	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within mitotic cytokinesis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within spindle assembly	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in centrosome	IDA Inferred from Direct Assay more info	PubMed
located_in microtubule	IDA Inferred from Direct Assay more info	PubMed
located_in mitotic spindle	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: microtubule-associated protein 9

Names: aster-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001278845.1 → NP_001265774.1 microtubule-associated protein 9

See identical proteins and their annotated locations for NP_001265774.1

Status: PROVISIONAL

Source sequence(s)

JQ768417

UniProtKB/TrEMBL

M9P175

Related

ENSDARP00000113420.1, ENSDART00000133937.3

Conserved Domains (2) summary

PRK12704
Location:430 → 585

PRK12704; phosphodiesterase; Provisional

pfam15782
Location:92 → 237

GREB1; Gene regulated by oestrogen in breast cancer

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007112.7 Reference GRCz11 Primary Assembly

Range

25737767..25749839 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_009291048.3 → XP_009289323.1 microtubule-associated protein 9 isoform X1

UniProtKB/TrEMBL

A0A8M3B099

Conserved Domains (2) summary

cd16269
Location:532 → 543

GBP_C; coiled coil [structural motif]

cl20817
Location:466 → 567

GBP_C; Guanylate-binding protein, C-terminal domain