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znf839 zinc finger protein 839 [ Danio rerio (zebrafish) ]

Gene ID: 566882, updated on 4-Jan-2025

Summary

Official Symbol
znf839provided by ZNC
Official Full Name
zinc finger protein 839provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-4936
See related
Ensembl:ENSDARG00000076988 AllianceGenome:ZFIN:ZDB-GENE-030131-4936
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fe11g03; wu:fe11g03
Summary
Predicted to enable metal ion binding activity. Orthologous to human ZNF839 (zinc finger protein 839). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See znf839 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (31623356..31639863, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (31606395..31622987, complement)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene ADP-ribosylserine hydrolase Neighboring gene cyclin dependent kinase 2 interacting protein Neighboring gene putative nuclease HARBI1 Neighboring gene visual system homeobox 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423822.1NP_001410751.1  zinc finger protein 839

    Status: VALIDATED

    Source sequence(s)
    CR628322, CT027705
    UniProtKB/TrEMBL
    A0A8N7UV57, X1WCH5
    Related
    ENSDARP00000127918.1, ENSDART00000154196.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    31623356..31639863 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394997.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    525442..531376 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)