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gp27 DNA ligase [ Pseudomonas phage LKA1 ]

Gene ID: 5687519, updated on 8-Jan-2023

Summary

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Gene symbol
gp27
Gene description
DNA ligase
Locus tag
AV952_gp27
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas phage LKA1 (nat-host: Pseudomonas aeruginosa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Autographiviridae; Krylovirinae; Stubburvirus
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Genomic context

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Sequence:
NC_009936.1 (11397..12413)

NC_009936.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative DNA helicase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene DNA polymerase Neighboring gene hypothetical protein Neighboring gene DNA Polymerase-binding protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009936.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of Pseudomonas aeruginosa phages LKD16 and LKA1: establishment of the phiKMV subgroup within the T7 supergroup. Ceyssens PJ, et al. J Bacteriol, 2006 Oct. PMID 16980495, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DNA ligase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009936.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001522868.1 DNA ligase [Pseudomonas phage LKA1]

    See identical proteins and their annotated locations for YP_001522868.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q0E5Y7
    Conserved Domains (3) summary
    PHA00454
    Location:6 → 330
    PHA00454; ATP-dependent DNA ligase
    cl08424
    Location:306 → 329
    OBF_DNA_ligase_family; The Oligonucleotide/oligosaccharide binding (OB)-fold domain is a DNA-binding module that is part of the catalytic core unit of ATP dependent DNA ligases
    cl12015
    Location:22 → 224
    Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
Nucleotide Protein
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