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LOC569097 uncharacterized LOC569097 [ Danio rerio (zebrafish) ]

Gene ID: 569097, updated on 17-Sep-2024

Summary

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Gene symbol
LOC569097
Gene description
uncharacterized LOC569097
See related
Ensembl:ENSDARG00000097740
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC569097 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (31063209..31068438, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (30932364..30938299, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 5 Neighboring gene si:dkey-66i24.7 Neighboring gene elongin B Neighboring gene zgc:153292

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein LOC569097

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    31063209..31068438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009299505.3 → XP_009297780.1  uncharacterized protein LOC569097

    See identical proteins and their annotated locations for XP_009297780.1

    UniProtKB/TrEMBL
    A0A8M1QLV3, E9QD98
    Related
    ENSDARP00000119872.1, ENSDART00000140998.3
    Conserved Domains (1) summary
    cl21562
    Location:249 → 370
    DDE_Tnp_4; DDE superfamily endonuclease

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394534.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    136328..142228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021471442.2 → XP_021327117.1  uncharacterized protein LOC569097

    UniProtKB/TrEMBL
    A0A8M1QLV3, E9QD98
    Conserved Domains (1) summary
    cl21562
    Location:249 → 370
    DDE_Tnp_4; DDE superfamily endonuclease
Nucleotide Protein Strain
Heading Accession and Version

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