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ogal O-GlcNAcase like [ Danio rerio (zebrafish) ]

Gene ID: 571547, updated on 2-Nov-2024

Summary

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Official Symbol
ogalprovided by ZNC
Official Full Name
O-GlcNAcase likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-110914-153
See related
Ensembl:ENSDARG00000103266 AllianceGenome:ZFIN:ZDB-GENE-110914-153
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
mgea5l; si:dkey-93h22.6
Summary
Predicted to enable beta-N-acetylglucosaminidase activity. Predicted to be involved in glycoprotein metabolic process. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See ogal in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (45110794..45126509)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (44696428..44711586)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator-activated receptor gamma coactivator-related protein 1 Neighboring gene si:dkey-93h22.8 Neighboring gene si:dkey-93h22.4 Neighboring gene calcium activated nucleotidase 1b Neighboring gene arylformamidase Neighboring gene thymidine kinase 1, soluble

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. A network of epigenetic regulators guides developmental haematopoiesis in vivo. Huang HT, et al. Nat Cell Biol, 2013 Dec. PMID 24240475, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables beta-N-acetylglucosaminidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in glycoprotein metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
protein O-GlcNAcase; si:dkey-93h22.6
Names
meningioma expressed antigen 5 (hyaluronidase) like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    45110794..45126509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009306329.4 → XP_009304604.1  protein O-GlcNAcase

    UniProtKB/TrEMBL
    A0A0R4IC35, A0A8M3B747
    Related
    ENSDARP00000132557.1, ENSDART00000158188.3
    Conserved Domains (1) summary
    pfam07555
    Location:11 → 312
    NAGidase; beta-N-acetylglucosaminidase
Nucleotide Protein
Heading Accession and Version

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