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tmem101 transmembrane protein 101 [ Danio rerio (zebrafish) ]

Gene ID: 572154, updated on 2-Nov-2024

Summary

Official Symbol
tmem101provided by ZNC
Official Full Name
transmembrane protein 101provided by ZNC
Primary source
ZFIN:ZDB-GENE-121214-289
See related
Ensembl:ENSDARG00000114508 AllianceGenome:ZFIN:ZDB-GENE-121214-289
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch1073-13h15.1
Summary
Predicted to be located in membrane. Orthologous to human TMEM101 (transmembrane protein 101). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See tmem101 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (3262564..3273072)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (3433675..3444183)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene si:ch1073-13h15.3 Neighboring gene guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b Neighboring gene leucine-rich repeat-containing protein 70 Neighboring gene LSM12 homolog b Neighboring gene glucose-6-phosphatase catalytic subunit 3

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001327885.1NP_001314814.1  transmembrane protein 101

    Status: VALIDATED

    Source sequence(s)
    CABZ01088175, FP101973
    UniProtKB/TrEMBL
    A0A2R8PYE5, A0A8M1P3X1
    Related
    ENSDARP00000144927.1, ENSDART00000184264.1
    Conserved Domains (1) summary
    pfam15111
    Location:6254
    TMEM101; TMEM101 protein family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    3262564..3273072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)