U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tekt3 tektin 3 [ Danio rerio (zebrafish) ]

Gene ID: 572368, updated on 2-Nov-2024

Summary

Official Symbol
tekt3provided by ZNC
Official Full Name
tektin 3provided by ZNC
Primary source
ZFIN:ZDB-GENE-080130-2
See related
Ensembl:ENSDARG00000045038 AllianceGenome:ZFIN:ZDB-GENE-080130-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Acts upstream of or within cilium assembly. Predicted to be located in motile cilium. Predicted to be active in microtubule cytoskeleton and sperm flagellum. Is expressed in neuromast; neuromast hair cell; and otic sensory epithelium. Human ortholog(s) of this gene implicated in spermatogenic failure 81. Orthologous to human TEKT3 (tektin 3). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See tekt3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (37327866..37343933, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (37153118..37169148, complement)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108191741 Neighboring gene peripheral myelin protein 22b Neighboring gene uncharacterized LOC137496774 Neighboring gene si:ch211-152f22.4

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cilium assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cilium movement involved in cell motility IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cilium movement involved in cell motility IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 
is_active_in microtubule cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 
is_active_in sperm flagellum IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    37327866..37343933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_696077.7XP_701169.2  tektin-3

    UniProtKB/TrEMBL
    A0A8N7URI0, E7F7G5
    Related
    ENSDARP00000127387.1, ENSDART00000153281.2
    Conserved Domains (1) summary
    pfam03148
    Location:97476
    Tektin; Tektin family