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ARV1_gp17 CRISPR/Cas system associated [ Acidianus rod-shaped virus 1 ]

Gene ID: 5729529, updated on 8-Jan-2023

Summary

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Gene symbol
ARV1_gp17
Gene description
CRISPR/Cas system associated
Locus tag
ARV1_gp17
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acidianus rod-shaped virus 1 (nat-host: Acidianus sp. Acii26)
Lineage
Viruses; Adnaviria; Zilligvirae; Taleaviricota; Tokiviricetes; Ligamenvirales; Rudiviridae; Itarudivirus; Itarudivirus ARV1
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Genomic context

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Sequence:
NC_009965.1 (5585..6208)

NC_009965.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene protease Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009965.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel rudivirus, ARV1, of the hyperthermophilic archaeal genus Acidianus. Vestergaard G, et al. Virology, 2005 May 25. PMID 15866073

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CRISPR/Cas system associated
YP_001542634.1
  • putative RecB family exonuclease usually found in association with clustered regularly interspaced short palindromic repeats (CRISPR). However, no such repeats are present in archaeal virus genomes. A protein cluster containing the same domain is also found in other archaeal viruses (VRK0619).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009965.1 Reference assembly

    Range
    5585..6208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001542634.1 CRISPR/Cas system associated [Acidianus rod-shaped virus 1]

    See identical proteins and their annotated locations for YP_001542634.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q50I54
    Conserved Domains (1) summary
    PHA01622
    Location:1 → 207
    PHA01622; CRISPR-associated Cas4-like protein
Nucleotide Protein
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