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dnajc3b DnaJ (Hsp40) homolog, subfamily C, member 3b [ Danio rerio (zebrafish) ]

Gene ID: 58154, updated on 2-Nov-2024

Summary

Official Symbol
dnajc3bprovided by ZNC
Official Full Name
DnaJ (Hsp40) homolog, subfamily C, member 3bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-000831-4
See related
Ensembl:ENSDARG00000017874 AllianceGenome:ZFIN:ZDB-GENE-000831-4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
prkri; fc17a06; wu:fc17a06
Summary
Predicted to enable misfolded protein binding activity and protein-folding chaperone binding activity. Predicted to be involved in protein folding in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum. Orthologous to human DNAJC3 (DnaJ heat shock protein family (Hsp40) member C3). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See dnajc3b in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (20780076..20797227, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (20539851..20556829, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 3 Neighboring gene cytochrome b5 domain containing 1 Neighboring gene uncharacterized LOC110439934 Neighboring gene claudin 15a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables misfolded protein binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein-folding chaperone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in protein folding in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
dnaJ homolog subfamily C member 3b
Names
protein-kinase, interferon-inducible double stranded RNA dependent inhibitor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131630.2NP_571705.2  dnaJ homolog subfamily C member 3b precursor

    Status: VALIDATED

    Source sequence(s)
    AL928637
    Related
    ENSDARP00000141699.2, ENSDART00000162357.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    20780076..20797227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)