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E030024N20Rik RIKEN cDNA E030024N20 gene [ Mus musculus (house mouse) ]

Gene ID: 595139, updated on 17-Aug-2024

Summary

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Official Symbol
E030024N20Rikprovided by MGI
Official Full Name
RIKEN cDNA E030024N20 geneprovided by MGI
Primary source
MGI:MGI:2442009
See related
AllianceGenome:MGI:2442009
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9030417F11Rik
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Genomic context

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See E030024N20Rik in Genome Data Viewer
Location:
19 A; 19 11.04 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (16141462..16147822)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (16164098..16170458)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein 37, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_45651 Neighboring gene STARR-seq mESC enhancer starr_45652 Neighboring gene predicted gene, 32026 Neighboring gene STARR-seq mESC enhancer starr_45653 Neighboring gene guanine nucleotide binding protein, alpha q polypeptide Neighboring gene peptidylprolyl isomerase A, pseudogene 8 Neighboring gene phosphatidylethanolamine-binding protein pseudogene Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033228.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC102062

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    16141462..16147822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005212.2: Suppressed sequence

    Description
    NG_005212.2: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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