U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm20754 predicted gene, 20754 [ Mus musculus (house mouse) ]

Gene ID: 626082, updated on 9-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
Gm20754provided by MGI
Official Full Name
predicted gene, 20754provided by MGI
Primary source
MGI:MGI:5434110
See related
Ensembl:ENSMUSG00000103428 AllianceGenome:MGI:5434110
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in CNS E18 (RPKM 1.0), cortex adult (RPKM 0.7) and 3 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm20754 in Genome Data Viewer
Location:
3; 3 E3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (72973684..73502163)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (73066351..73594830)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07953 Neighboring gene sucrase isomaltase Neighboring gene SLIT and NTRK-like family, member 3 Neighboring gene STARR-seq mESC enhancer starr_07954 Neighboring gene STARR-seq mESC enhancer starr_07955 Neighboring gene STARR-seq mESC enhancer starr_07956 Neighboring gene RIKEN cDNA 4930509J09 gene Neighboring gene STARR-seq mESC enhancer starr_07957 Neighboring gene STARR-seq mESC enhancer starr_07958 Neighboring gene STARR-seq mESC enhancer starr_07959 Neighboring gene STARR-seq mESC enhancer starr_07960 Neighboring gene STARR-seq mESC enhancer starr_07961 Neighboring gene butyrylcholinesterase Neighboring gene STARR-seq mESC enhancer starr_07962 Neighboring gene STARR-seq mESC enhancer starr_07963 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. LncRNA RUS shapes the gene expression program towards neurogenesis. Schneider MF, et al. Life Sci Alliance, 2022 Oct. PMID 35688487, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040557.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC160470, AK044425
    Related
    ENSMUST00000192642.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    72973684..73502163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.