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Dcpp2 demilune cell and parotid protein 2 [ Mus musculus (house mouse) ]

Gene ID: 630537, updated on 2-Nov-2024

Summary

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Official Symbol
Dcpp2provided by MGI
Official Full Name
demilune cell and parotid protein 2provided by MGI
Primary source
MGI:MGI:3644062
See related
Ensembl:ENSMUSG00000096278 AllianceGenome:MGI:3644062
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SPT-2; Dcpp-2; EG630537
Summary
Predicted to be active in extracellular space. Is expressed in embryo. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Dcpp2 in Genome Data Viewer
Location:
17 A3.3; 17 12.12 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (24117696..24119762)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (23898722..23900788)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene demilune cell and parotid protein 1 Neighboring gene STARR-seq mESC enhancer starr_42066 Neighboring gene predicted gene, 50058 Neighboring gene STARR-seq mESC enhancer starr_42067 Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene predicted gene, 41545 Neighboring gene demilune cell and parotid protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Identification of a human ortholog of the mouse Dcpp gene locus, encoding a novel member of the CSP-1/Dcpp salivary protein family. Mullins JJ, et al. Physiol Genomics, 2006 Dec 13. PMID 16954406
  2. Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord. Tamplin OJ, et al. Dev Biol, 2011 Dec 15. PMID 22008794
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC70235

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
demilune cell and parotid protein 2
Names
sublingual parotid tongue-2 salivary protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039238.2 → NP_001034327.2  demilune cell and parotid protein 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC110262
    Consensus CDS
    CCDS37479.1
    UniProtKB/TrEMBL
    A0MA77, B7ZWD8, E9PYC2
    Related
    ENSMUSP00000085966.6, ENSMUST00000088598.7
    Conserved Domains (1) summary
    cl03205
    Location:28 → 158
    Jacalin_like; Jacalin-like lectin domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    24117696..24119762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017317598.2 → XP_017173087.1  demilune cell and parotid protein 2 isoform X1

    UniProtKB/TrEMBL
    A0MA77, B7ZWD8
    Related
    ENSMUSP00000157331.2, ENSMUST00000234110.2
    Conserved Domains (1) summary
    cl03205
    Location:53 → 183
    Jacalin_like; Jacalin-like lectin domain
Nucleotide Protein Strain
Heading Accession and Version

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