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gag Gag [ African green monkey simian foamy virus ]

Gene ID: 6386656, updated on 16-Aug-2018

Summary

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Gene symbol
gag
Gene description
Gag
Locus tag
SFVagm_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
African green monkey simian foamy virus (strain: LK-3)
Lineage
Viruses; Retro-transcribing viruses; Retroviridae; Spumaretrovirinae; Spumavirus
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Genomic context

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Sequence:
NC_010820.1 (1825..3756)

NC_010820.1Genomic Context describing neighboring genes Neighboring gene Pol precursor Neighboring gene Env Neighboring gene Bet;Tas

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010820.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A unique spumavirus Gag N-terminal domain with functional properties of orthoretroviral matrix and capsid. Goldstone DC, et al. PLoS Pathog, 2013 May. PMID 23675305, Free PMC Article
  2. Investigating the intercellular spreading properties of the foamy virus Gag protein. Tobaly-Tapiero J, et al. PLoS One, 2012. PMID 22393357, Free PMC Article
  3. Genomic organization and expression of simian foamy virus type 3 (SFV-3). Renne R, et al. Virology, 1992 Feb. PMID 1310187

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. we have undertaken a structural, biophysical and virological study of Prototypic Foamy Virus -Gag.
    Title: A unique spumavirus Gag N-terminal domain with functional properties of orthoretroviral matrix and capsid.
  2. analysis of the the intercellular spreading properties of the foamy virus Gag protein
    Title: Investigating the intercellular spreading properties of the foamy virus Gag protein.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
Gag
YP_001956721.2
  • Precise 5' end of coding region undetermined.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010820.1 Reference assembly

    Range
    1825..3756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001956721.2 Gag [African green monkey simian foamy virus]

    See identical proteins and their annotated locations for YP_001956721.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P27400
    Conserved Domains (1) summary
    pfam03276
    Location:3 → 606
    Gag_spuma; Spumavirus gag protein
Protein Accession Links
GenPept Link UniProtKB Link
AAA47795.1

Gene LinkOut

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