clybl citrate lyase beta like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: clyblprovided by ZNC
Official Full Name: citrate lyase beta likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030516-6
See related: Ensembl:ENSDARG00000029729 AllianceGenome:ZFIN:ZDB-GENE-030516-6
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb504; fk25c09; im:6908766; wu:fk25c09; zgc:123316; zgc:136594
Summary: Predicted to enable (S)-citramalyl-CoA lyase activity. Predicted to be involved in regulation of cobalamin metabolic process. Is expressed in brain. Orthologous to human CLYBL (citramalyl-CoA lyase). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (31167711..31259147)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (31355771..31448401)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

G47938 (e-PCR)
- UniSTS:108704

fk25c09.x1 (e-PCR)
- UniSTS:200698

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables (S)-citramalyl-CoA lyase activity	IBA Inferred from Biological aspect of Ancestor more info
enables catalytic activity	IEA Inferred from Electronic Annotation more info
enables lyase activity	IEA Inferred from Electronic Annotation more info
enables malate synthase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in regulation of cobalamin metabolic process	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: citramalyl-CoA lyase, mitochondrial

NP_001032493.2

EC 2.3.3.9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.