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RPS27AP16 RPS27A pseudogene 16 [ Homo sapiens (human) ]

Gene ID: 643358, updated on 17-Jun-2024

Summary

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Official Symbol
RPS27AP16provided by HGNC
Official Full Name
RPS27A pseudogene 16provided by HGNC
Primary source
HGNC:HGNC:36855
See related
Ensembl:ENSG00000224631 AllianceGenome:HGNC:36855
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS27A_8_1488
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Genomic context

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See RPS27AP16 in Genome Data Viewer
Location:
16q21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (61055415..61055931, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (66843253..66843769, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (61089319..61089835, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene glyceronephosphate O-acyltransferase pseudogene Neighboring gene uncharacterized LOC107984812 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:60934428-60935009 Neighboring gene VISTA enhancer hs1383 Neighboring gene uncharacterized LOC105371301 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:61297235-61297884 Neighboring gene NANOG hESC enhancer GRCh37_chr16:61357837-61358373 Neighboring gene uncharacterized LOC105371302 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:61407998-61408223

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • ribosomal protein S27a pseudogene 16

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010157.2 

    Range
    101..617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    61055415..61055931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    66843253..66843769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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