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GOLGA8T golgin A8 family member T [ Homo sapiens (human) ]

Gene ID: 653075, updated on 17-Jun-2024

Summary

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Official Symbol
GOLGA8Tprovided by HGNC
Official Full Name
golgin A8 family member Tprovided by HGNC
Primary source
HGNC:HGNC:44410
See related
Ensembl:ENSG00000261247 AllianceGenome:HGNC:44410
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be involved in Golgi organization. Predicted to be active in Golgi cis cisterna; Golgi cisterna membrane; and cis-Golgi network. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in testis (RPKM 12.9), thyroid (RPKM 10.8) and 22 other tissues See more
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Genomic context

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See GOLGA8T in Genome Data Viewer
Location:
15q13.2
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (30135051..30148748)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (27922980..27940478)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (30427254..30440951)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene dynamin 1 pseudogene 28 Neighboring gene ULK4 pseudogene 3 Neighboring gene U8 small nucleolar RNA Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:30410195-30410695 Neighboring gene RNA, 7SL, cytoplasmic 469, pseudogene Neighboring gene dynamin 1 pseudogene 30 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:30459311-30459812 Neighboring gene uncharacterized LOC105370746

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi cis cisterna IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in Golgi cisterna membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cis-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
golgin subfamily A member 8T

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355469.2 → NP_001342398.1  golgin subfamily A member 8T

    Status: VALIDATED

    Source sequence(s)
    AC120045
    Consensus CDS
    CCDS86440.1
    UniProtKB/Swiss-Prot
    H3BQL2
    UniProtKB/TrEMBL
    A0A1B0GVY7
    Related
    ENSP00000455826.1, ENST00000569052.2
    Conserved Domains (2) summary
    pfam15070
    Location:226 → 620
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
    cl25732
    Location:72 → 328
    SMC_N; RecF/RecN/SMC N terminal domain

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    30135051..30148748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024450032.2 → XP_024305800.1  golgin subfamily A member 8T isoform X1

    UniProtKB/TrEMBL
    A0A1B0GVY7
    Conserved Domains (2) summary
    COG1196
    Location:59 → 315
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15070
    Location:213 → 607
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p14 PATCHES

    Range
    2303996..2321489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054331809.1 → XP_054187784.1  golgin subfamily A member 8T isoform X2

  2. XM_054331808.1 → XP_054187783.1  golgin subfamily A member 8T isoform X1

    UniProtKB/TrEMBL
    A0A1B0GVY7

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187660.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    2416480..2433973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054330037.1 → XP_054186012.1  golgin subfamily A member 8T isoform X2

  2. XM_054330036.1 → XP_054186011.1  golgin subfamily A member 8T isoform X1

    UniProtKB/TrEMBL
    A0A1B0GVY7

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    27922980..27940478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054378658.1 → XP_054234633.1  golgin subfamily A member 8T isoform X3

  2. XM_054378657.1 → XP_054234632.1  golgin subfamily A member 8T isoform X1

    UniProtKB/TrEMBL
    A0A1B0GVY7

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_033933.1: Suppressed sequence

    Description
    NR_033933.1: This RefSeq was removed because there is insufficient support for the transcript.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
H3BQL2.1 GenPept UniProtKB/Swiss-Prot:H3BQL2

Gene LinkOut

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Chemical Information
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Research Materials