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Gad1os glutamate decarboxylase 1, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 68986, updated on 8-Feb-2024

Summary

Official Symbol
Gad1osprovided by MGI
Official Full Name
glutamate decarboxylase 1, opposite strandprovided by MGI
Primary source
MGI:MGI:1916236
See related
Ensembl:ENSMUSG00000087264 AllianceGenome:MGI:1916236
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1500002O10Rik
Expression
Biased expression in testis adult (RPKM 7.6), kidney adult (RPKM 0.8) and 5 other tissues See more
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Genomic context

See Gad1os in Genome Data Viewer
Location:
2 C2; 2 41.52 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (70320284..70393701, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (70489940..70563357, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_04760 Neighboring gene ribosomal protein L9, pseudogene 7 Neighboring gene STARR-seq mESC enhancer starr_04762 Neighboring gene trans-acting transcription factor 5 Neighboring gene glutamate rich 2 Neighboring gene STARR-seq mESC enhancer starr_04764 Neighboring gene glutamate decarboxylase 1 Neighboring gene predicted pseudogene 16510 Neighboring gene predicted gene, 46745

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Clone Names

  • AC097273.3

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040496.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK005124, AW456826
    Related
    ENSMUST00000151851.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    70320284..70393701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)