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CXXC5 CXXC finger protein 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 694746, updated on 17-Aug-2024

Summary

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Official Symbol
CXXC5provided by VGNC
Official Full Name
CXXC finger protein 5provided by VGNC
Primary source
VGNC:VGNC:71594
Locus tag
EGK_16908
See related
Ensembl:ENSMMUG00000001941
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CXXC5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (137039279..137075462)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (137420675..137456441)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114679029 Neighboring gene ubiquitin conjugating enzyme E2 D2 Neighboring gene uncharacterized LOC106998963 Neighboring gene pleckstrin and Sec7 domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyl-CpG binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CXXC-type zinc finger protein 5
Names
CXXC finger 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266606.1 → NP_001253535.1  CXXC-type zinc finger protein 5

    See identical proteins and their annotated locations for NP_001253535.1

    Status: PROVISIONAL

    Source sequence(s)
    JV047318
    UniProtKB/TrEMBL
    A0A8J8YJU6, F6TRL8, G7MUX3
    Related
    ENSMMUP00000076735.1, ENSMMUT00000108789.1
    Conserved Domains (1) summary
    pfam02008
    Location:257 → 298
    zf-CXXC; CXXC zinc finger domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    137039279..137075462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028849041.1 → XP_028704874.1  CXXC-type zinc finger protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU6, F6TRL8, G7MUX3
    Related
    ENSMMUP00000074649.1, ENSMMUT00000080405.1
    Conserved Domains (1) summary
    pfam02008
    Location:257 → 298
    zf-CXXC; CXXC zinc finger domain

  2. XM_015140814.2 → XP_014996300.1  CXXC-type zinc finger protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU6, F6TRL8, G7MUX3
    Related
    ENSMMUP00000075701.1, ENSMMUT00000082877.1
    Conserved Domains (1) summary
    pfam02008
    Location:257 → 298
    zf-CXXC; CXXC zinc finger domain

  3. XM_015140816.2 → XP_014996302.1  CXXC-type zinc finger protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU6, F6TRL8, G7MUX3
    Conserved Domains (1) summary
    pfam02008
    Location:257 → 298
    zf-CXXC; CXXC zinc finger domain

  4. XM_015140818.2 → XP_014996304.1  CXXC-type zinc finger protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU6, F6TRL8, G7MUX3
    Related
    ENSMMUP00000077780.1, ENSMMUT00000089564.1
    Conserved Domains (1) summary
    pfam02008
    Location:257 → 298
    zf-CXXC; CXXC zinc finger domain

  5. XM_015140813.2 → XP_014996299.1  CXXC-type zinc finger protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU6, F6TRL8, G7MUX3
    Conserved Domains (1) summary
    pfam02008
    Location:257 → 298
    zf-CXXC; CXXC zinc finger domain

  6. XM_028849040.1 → XP_028704873.1  CXXC-type zinc finger protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8J8YJU6, F6TRL8, G7MUX3
    Related
    ENSMMUP00000065679.1, ENSMMUT00000084039.1
    Conserved Domains (1) summary
    pfam02008
    Location:257 → 298
    zf-CXXC; CXXC zinc finger domain
Nucleotide Protein
Heading Accession and Version

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