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LOC7011370 VP3 [ Rotavirus A ]

Gene ID: 7011370, updated on 18-Aug-2023

Summary

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Gene symbol
LOC7011370
Gene description
VP3
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rotavirus A (strain: RVA/Simian-tc/ZAF/SA11-H96/1958/G3P5B[2], serotype: G3)
Lineage
Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Rotavirus
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Genomic context

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Location:
segment: 3
Sequence:
NC_011508.2 (50..2557)

NC_011508.2Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011508.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of rotavirus possessing a DS-1-like VP3 gene from pigs in Brazil: Evidence for zooanthroponotic transmission. Neves MAO, et al. Infect Genet Evol, 2020 Apr. PMID 31870971
  2. Crystal structure of the C-terminal 2',5'-phosphodiesterase domain of group A rotavirus protein VP3. Brandmann T, et al. Proteins, 2015 May. PMID 25758703, Free PMC Article
  3. Genome heterogeneity of SA11 rotavirus due to reassortment with "O" agent. Small C, et al. Virology, 2007 Mar 15. PMID 17059839, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Characterization of rotavirus possessing a DS-1-like VP3 gene from pigs in Brazil: Evidence for zooanthroponotic transmission.
    Title: Characterization of rotavirus possessing a DS-1-like VP3 gene from pigs in Brazil: Evidence for zooanthroponotic transmission.
  2. crystal structure of the 2',5'-phosphodiesterase domain of group A rotavirus protein VP3 at high resolution.
    Title: Crystal structure of the C-terminal 2',5'-phosphodiesterase domain of group A rotavirus protein VP3.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
VP3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011508.2 Reference assembly

    Range
    50..2557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002302228.1 VP3 [Rotavirus A]

    See identical proteins and their annotated locations for YP_002302228.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A2T3S5
    UniProtKB/TrEMBL
    A2T3S1
    Conserved Domains (2) summary
    pfam05213
    Location:693 → 801
    Corona_NS2A; Coronavirus NS2A protein
    pfam06929
    Location:1 → 687
    Rotavirus_VP3; Rotavirus VP3 protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials